Package: lmQCM 0.2.4

Zhi Huang

lmQCM: An Algorithm for Gene Co-Expression Analysis

Implementation based on Zhang, Jie & Huang, Kun (2014) <doi:10.4137/CIN.S14021> Normalized ImQCM: An Algorithm for Detecting Weak Quasi-Cliques in Weighted Graph with Applications in Gene Co-Expression Module Discovery in Cancers. Cancer informatics, 13, CIN-S14021.

Authors:Zhi Huang [aut, cre], Jie Zhang [aut, ctb], Kun Huang [aut, ctb], Zhi Han [aut, ctb]

lmQCM_0.2.4.tar.gz
lmQCM_0.2.4.zip(r-4.5)lmQCM_0.2.4.zip(r-4.4)lmQCM_0.2.4.zip(r-4.3)
lmQCM_0.2.4.tgz(r-4.4-any)lmQCM_0.2.4.tgz(r-4.3-any)
lmQCM_0.2.4.tar.gz(r-4.5-noble)lmQCM_0.2.4.tar.gz(r-4.4-noble)
lmQCM_0.2.4.tgz(r-4.4-emscripten)lmQCM_0.2.4.tgz(r-4.3-emscripten)
lmQCM.pdf |lmQCM.html✨
lmQCM/json (API)

Peer review:

Bug tracker:https://github.com/huangzhii/lmqcm/issues

On CRAN:

4 exports 5 stars 2.80 score 50 dependencies 12 mentions 14 scripts 252 downloads

Last updated 2 years agofrom:586da1915f. Checks:OK: 7. Indexed: yes.

Exports:fastFilterlmQCMlocalMaximumQCMmerging_lmQCM

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgenefilterGenomeInfoDbGenomeInfoDbDatagluehmshttrIRangesjsonliteKEGGRESTlatticelifecycleMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpkgconfigplogrpngprettyunitsprogressR6rlangRSQLiteS4VectorssurvivalsysUCSC.utilsvctrsXMLxtableXVectorzlibbioc