Package: lmQCM 0.2.4

Zhi Huang

lmQCM: An Algorithm for Gene Co-Expression Analysis

Implementation based on Zhang, Jie & Huang, Kun (2014) <doi:10.4137/CIN.S14021> Normalized ImQCM: An Algorithm for Detecting Weak Quasi-Cliques in Weighted Graph with Applications in Gene Co-Expression Module Discovery in Cancers. Cancer informatics, 13, CIN-S14021.

Authors:Zhi Huang [aut, cre], Jie Zhang [aut, ctb], Kun Huang [aut, ctb], Zhi Han [aut, ctb]

lmQCM_0.2.4.tar.gz
lmQCM_0.2.4.zip(r-4.7-any)lmQCM_0.2.4.zip(r-4.6-any)lmQCM_0.2.4.zip(r-4.5-any)
lmQCM_0.2.4.tgz(r-4.6-any)lmQCM_0.2.4.tgz(r-4.5-any)
lmQCM_0.2.4.tar.gz(r-4.7-any)lmQCM_0.2.4.tar.gz(r-4.6-any)
lmQCM_0.2.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
lmQCM/json (API)

# Install 'lmQCM' in R:
install.packages('lmQCM', repos = c('https://huangzhii.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/huangzhii/lmqcm/issues

On CRAN:

Conda:

4.58 score 4 stars 19 scripts 319 downloads 12 mentions 4 exports 48 dependencies

Last updated from:586da1915f. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK227
source / vignettesOK421
linux-releaseOK215
macos-releaseOK286
macos-oldrelOK249
windows-develOK180
windows-releaseOK148
windows-oldrelOK193
wasm-releaseOK121

Exports:fastFilterlmQCMlocalMaximumQCMmerging_lmQCM

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocBaseUtilsBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgenefiltergenericsgluehmshttrIRangesjsonliteKEGGRESTlatticelifecycleMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpkgconfigpngprettyunitsprogressR6rlangRSQLiteS4VectorsSeqinfosurvivalsysvctrsXMLxtableXVector